ACTG Publications

TitleAuthorsDateJournalIssueVolume
Association study of common genetic variants and HIV-1 acquisition in 6,300 infected cases and 7,200 controls.McLaren, Paul J ; Coulonges, Cédric ; Ripke, Stephan ; van den Berg, Leonard ; Buchbinder, Susan ; Carrington, Mary ; Cossarizza, Andrea ; Dalmau, Judith ; Deeks, Steven G ; Delaneau, Olivier ; De Luca, Andrea ; Goedert, James J ; Haas, David ; Herbeck, Joshua T ; Kathiresan, Sekar ; Kirk, Gregory D ; Lambotte, Olivier ; Luo, Ma ; Mallal, 2013PLoS Pathog79
Evaluating the Impact of Functional Genetic Variation on HIV-1 Control.McLaren, Paul J ; Pulit, Sara L ; Gurdasani, Deepti ; Bartha, István ; Shea, Patrick R ; Pomilla, Cristina ; Gupta, Namrata ; Gkrania-Klotsas, Effrossyni ; Young, Elizabeth H ; Bannert, Norbert ; Del Amo, Julia ; Gill, M John ; Gilmour, Jill ; Kellam, Paul ; Kelleher, Anthony D ; Sönnerborg, Anders ; Zangerle, Robert ; Post, Frank A ; Fish2017 11 27J Infect Dis9216
Fine-mapping classical HLA variation associated with durable host control of HIV-1 infection in African Americans.McLaren, Paul J ; Ripke, Stephan ; Pelak, Kimberly ; Weintrob, Amy C ; Patsopoulos, Nikolaos A ; Jia, Xiaoming ; Erlich, Rachel L ; Lennon, Niall J ; Kadie, Carl M ; Heckerman, David ; Gupta, Namrata ; Haas, David W ; Deeks, Steven G ; Pereyra, Florencia ; Walker, Bruce D ; DE Bakker, Paul I W ; International HIV Controllers Study2012 Oct 1Hum Mol Genet1921
Genetic predictors of cervical dysplasia in African American HIV-infected women: ACTG DACS 268.Cespedes, Michelle S ; Kerns, Sarah L ; Holzman, Robert S ; McLaren, Paul J ; Ostrer, Harry ; Aberg, Judith A2013 Nov-DecHIV Clin Trials614
A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control.Bartha, István ; Carlson, Jonathan M ; Brumme, Chanson J ; McLaren, Paul J ; Brumme, Zabrina L ; John, Mina ; Haas, David W ; Martinez-Picado, Javier ; Dalmau, Judith ; López-Galíndez, Cecilio ; Casado, Concepción ; Rauch, Andri ; Günthard, Huldrych F ; Bernasconi, Enos ; Vernazza, Pietro ; Klimkait, Thomas ; Yerly, Sabine ; O'Brien, Steph2013Elife2
Genomewide association study of atazanavir pharmacokinetics and hyperbilirubinemia in AIDS Clinical Trials Group protocol A5202.Johnson, Daniel H ; Venuto, Charles ; Ritchie, Marylyn D ; Morse, Gene D ; Daar, Eric S ; McLaren, Paul J ; Haas, David W2014 AprPharmacogenet Genomics424
Genome-Wide Association Study of Human Immunodeficiency Virus (HIV)-1 Coreceptor Usage in Treatment-Naive Patients from An AIDS Clinical Trials Group Study.Henrich, Timothy J ; McLaren, Paul J ; Rao, Suhas S P ; Lin, Nina H ; Hanhauser, Emily ; Giguel, Francoise ; Gulick, Roy M ; Ribaudo, Heather ; DE Bakker, Paul I W ; Kuritzkes, Daniel R2014 MarOpen Forum Infect Dis11
Genome-wide association study of peripheral neuropathy with D-drug-containing regimens in AIDS Clinical Trials Group protocol 384.Leger, Paul D ; Johnson, Daniel H ; Robbins, Gregory K ; Shafer, Robert W ; Clifford, David B ; Li, Jun ; McLaren, Paul J ; Haas, David W2014 JunJ Neurovirol320
Genome-wide association study of virologic response with efavirenz-containing or abacavir-containing regimens in AIDS clinical trials group protocols.Lehmann, David S ; Ribaudo, Heather J ; Daar, Eric S ; Gulick, Roy M ; Haubrich, Richard H ; Robbins, Gregory K ; DE Bakker, Paul I W ; Haas, David W ; McLaren, Paul J2015 FebPharmacogenet Genomics225
Host genetic predictors of the kynurenine pathway of tryptophan catabolism among treated HIV-infected Ugandans.Lee, Sulggi A ; Mefford, Joel A ; Huang, Yong ; Witte, John S ; Martin, Jeffrey N ; Haas, David W ; McLaren, Paul J ; Mushiroda, Taisei ; Kubo, Michiaki ; Byakwaga, Helen ; Hunt, Peter W ; Kroetz, Deanna L2016 Jul 17AIDS1130
The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.International HIV Controllers Study ; Pereyra, Florencia ; Jia, Xiaoming ; McLaren, Paul J ; Telenti, Amalio ; DE Bakker, Paul I W ; Walker, Bruce D ; Ripke, Stephan ; Brumme, Chanson J ; Pulit, Sara L ; Carrington, Mary ; Kadie, Carl M ; Carlson, Jonathan M ; Heckerman, David ; Graham, Robert R ; Plenge, Robert M ; Deeks, Steven G ; Giann2010 Dec 10Science6010330
Use of biological knowledge to inform the analysis of gene-gene interactions involved in modulating virologic failure with efavirenz-containing treatment regimens in ART-naïve ACTG clinical trials participants.Grady, Benjamin J ; Torstenson, Eric S ; McLaren, Paul J ; DE Bakker, Paul I W ; Haas, David W ; Robbins, Gregory K ; Gulick, Roy M ; Haubrich, Richard ; Ribaudo, Heather ; Ritchie, Marylyn D2011Pac Symp Biocomput